NPAC Support and Services

The Neuroimaging Processing and Analytics Core can support

• Organizing imaging data
  • scheduled and automatic BIDS-ificiation (ReproIn)
  • unattended REDCap integration
• Flywheel on-boarding
  • gear rule setup gearules
  • gear development support Flywheel Gears
• Scripting National Data Archive (NIH NDA) upload of imaging data
• Standardized processing of anatomical, BOLD, and diffusion sequences
  • Freesurfer
  • fmriprep + xcpd
  • Human Connectome Project
• Experimental pipelines
  • R2'
  • tat2
  • Neuromelanin
• “Super Computer” resources
  • Local HPC usage
  • CRC, PSC setup and/or training
• Pipeline scheduling, automation and containerization
• Source code version control and data provenance setup and/or training
• Phantom QC

mirrors: wiki confluence github